last updated Sunday, May 03, 2015

Arrhenius equation predicts that the rate of reaction increases if the temperature is raised. link
Aspirator is a device that produces vacuum by means of the Venturi effect. In an aspirator, fluid (liquid or gaseous) flows through a tube which then narrows. When the tube narrows, the fluid's speed increases, and because of the Venturi effect, its pressure decreases. Vacuum is taken from this point.
Atropisomer is a stereoisomer that results from hindered rotation about a single bond where the steric strain barrier to rotate is high enough to isolate the different conformers i.e., ortho-substituted biphenyls or binaphthalenes (i..e, BINAL) link
Auxochrome is a substituent that increases absorption of a molecule of a methyl, hydroxyl, alkoxyl or amino group or a halogen atom. If the auxochrome is conjugated with a π-electron system, the λ-max value is shifted to a longer wavelength (bathochromic) link
Beer-Lambert-Law is the basic law for all absorption processes (A=εcl). It states that the absorbance of a sample is directly proportional to the concentration of the solute in the sample, the path length and the molar extinction coefficient (ε). The law only applies for much diluted solution (c<10-4 mol/L) link
Bathochromic shift is a shift to higher wavelength in the UV-Vis spectrum (increased λ-value) link
Boiling point is the temperature when a liquid becomes a gas. It depends highly on the surrounding pressure. A lower surrounding pressure results in a lower boiling point (i.e., vacuum distillation) link
Bredt's Rule is an empirical observation that states that a double bond cannot be placed at the bridgehead of a bridged ring system, unless the rings are large enough. This is the reason why only one isomer of norbornene exists. link
Catalyst is a compound that increases the rate of the reaction by lowering the activation energy for a chemical reaction, but does not change the yield. link
Chromatography is a technique to separate compounds from each other. It is based on the distribution various compounds between the mobile phase and the stationary phase. link
Chromophore is a chemical group that absorbs light at a specific wavelength and so imparts color to a molecule i.e., carbonyl group or azo group. link
Condensation point is the temperature at which the conversion of a substance from the vapor state to a denser liquid or solid state takes place usually initiated by a reduction in temperature of the vapor. link
Coupling constant characterizes the line spacing (in Hz) within a multiplet in a 1H-NMR spectrum, which permits conclusions about the distance and the angle of interaction of the coupling partners. Decant(ing) the process in the laboratory when a liquid is transferred into a different container and the solid is left behind. link
Dew point the temperature at which a vapor begins to condense (which is not equal to the boiling point!). link
Diastereomer is a stereoisomer of a compound having two or more chiral centers that is not a mirror image of another stereoisomer of the same compound. link
Disproportionation refers to the transformation of a substance into two or more dissimilar substances usually by simultaneous oxidation and reduction i.e., Mn(III) forms Mn(II) and Mn(IV). link
Distillation is a technique to purify (primarily) liquids based on their different boiling points. link
Distribution coefficient also called partition coefficient. Quantifies the distribution of a compound between two different phases (K=c1/c2). The distribution coefficient between octanol and water is often referred to as log Kow. link
Emulsion is a suspension of finely divided particles in a continuous medium in which the particles are approximately 5 to 5,000 Å in size, do not settle out of the substance rapidly, and are not readily filtered i.e., oil and vinegar in a vinaigrette, or fat in water in milk. link
Enantiomer is a molecule that is not superimposable on its mirror image, related to chirality. link
Enantiomeric Excess is the ratio of one enantiomer to the other enantiomer in a mixture (abbreviated: e.e. or ee). It is often used in context of asymmetric synthesis. Related: diastereomeric excess. link
Exclusion rule describes the fact that a molecule with a center of inversion has peaks either in the infrared or in the Raman spectrum, but not in both. link
Extraction is a process to isolate a compound from a mixture by either temporary chemical modification or distribution within two layers. link
FID =Flame Ionization Detector, a detector used in gas chromatography, very sensitive but destroys the sample due to combustion. link
Freezing point is the temperature at which a liquid becomes a solid. Its depression can be used to determine the molecular weight of compounds (=colligative property). link
Hammond Postulate If two states, as for example, a transition state and an unstable intermediate, occur consecutively during a reaction process and have nearly the same energy content, their interconversion will involve only a small reorganization of the molecular structures. That is, along the reaction coordinate, species with similar energies also have similar structures. link
Heterogeneous is a system that consists of at least two phases (solid-liquid). link
Homogeneous is a system that consists of only one phase. link
HOMO is the highest occupied molecular orbital in a molecule. link
Hygroscopic is a compound that absorbs water from the air or a solution, nature of drying agents. link
Hyperchromic refers to an increased absorption of UV-Vis light (increased ε-value). link
Hypochromic refers to a decreased absorption of UV-Vis light (decreased ε-value).
Hypsochromic shift is the shift to lower wavelength in the UV-Vis spectrum (decreased λ-value).  link
In-situ refers to the synthesis of a reactive intermediate, which is not isolated since it is too difficult or too dangerous. link
Infrared spectrum is a spectroscopic technique to identify functional groups, looks at vibrational modes of the molecule. The modern instruments are FTIR instruments. link
Lachrymator a compound that makes the eyes fill with tears but does not damage them ("teargas") i.e., bromoacetone. link
Le Châtelier Principle describes equilibrium reactions and how to influence them by introducing stress. link
Lock-and-Key method describes the selectivity of enzymes towards certain substrates over others. link
LUMO lowest unoccupied molecular orbital. link
Melting point is the temperature at which a solid becomes a liquid, usually reported as a range (=lower number is the temperature when the solid starts to melt, the upper number is the temperature when the entire sample melted). If the sample decomposes, it should be noted as "dec." in parenthesis. link
Metalorganic a compound that possesses carbon but no direct M-C bond i.e., sodium acetate, Jacobsen's catalyst, etc.
Methylene chloride =dichloromethane link
Mobile Phase is a term used in chromatography. It consists usually of an organic solvent (or mixture) in column chromatography. link
Mother Liquor the solution that was separated from the crystals. link
Neat a term often used in infrared spectroscopy, means that only the pure compound was place in the infrared beam.
NMR spectroscopy is a spectroscopic technique to identify functional groups and structure of a compound. It looks at behavior of nuclear spins in an external magnetic field, frequently used as 1H or 13C-NMR spectroscopy in organic laboratories. link
Oligomer is a polymer or polymer intermediate containing relatively few structural units (more than two units). link
Organometallic the compound has at least one metal-carbon bond i.e., Grignard reagent, ferrocene, etc. link
Petroleum ether (also called petrolether or ligroin) is a mixture of different hydrocarbons. The name does not refer to oxygen containing compounds but much more on its volatility. It is available in different boiling point ranges i.e., 30-60 oC, 60-90 oC, 100-140 oC. link
Polymorphism describes the ability of a solid to exist in different crystalline forms i.e., silica, TiO2, etc. link
Pyrolysis is the process where organic compounds decompose when heated without burning. link
Pyrophoric means that a compound catches on fire when it comes in contact with air. Many finely divided metal powder or strong reducing reagents react like this i.e., Grignard reagents, organolithium compounds, Raney Nickel, LiAlH4. link
PTC =Phase Transfer Catalysis, utilizes a catalyst which is able to transport an ion from one phase (usually aqueous) into the other phase (organic). link
Quenching a reaction is terminating by deactivating reactive intermediates. link
Racemic mixture that is composed of equal amounts of dextrorotatory and levorotatory forms of the same compound and is not optically active. link
Recrystallization is a technique used to purify solids based on different solubilities of the impurity and the target compound. link
Reflux implies that a solution/solvent is heated to a boil while maintaining its volume constant. This is usually accomplished by using a device to catch the solvent vapors i.e., condenser. link
Refractive Index is a physical property that quantifies the refraction of light by a solid or liquid. It highly depends on the temperature and the wavelength it is observed. link
Retardation factor is the ratio of how far the center of a spot traveled compared to the solvent front (=Rf-value). link
Retention time is the time interval that passed between the sample injection and the appearance of the peak maximum. link
Rinsing/Rinse refers to the washing of a solid with small amounts of cold solvent to remove mother liquor and impurities from the surface.
Saturated Solution is a solution that contains the maximum amount of solute at a given temperature. link
Seeding is a technique to initiate crystallization from saturated or super-saturated solutions. link
Solvatochromism the change of a compounds color due to the solvent polarity i.e., Brooker merocyanine. link
Split-mode refers to the fact that only a small amount of the sample is actually introduced to the GC column. link
Stationary Phase is a term used in chromatography. It refers to the part, which absorbs the compound. The stronger the interaction is, the longer the compound requires moving through the column. link
Stevenson Rule states that when a fragmentation takes place in mass spectrometry, the positive charge remains on the fragment with the lowest ionization energy. link
Sublimation Point is the temperature at which a solid evaporates without melting first. link
Superheating the process at which a liquid is heated above its boiling point without vaporization. Can be avoided by adding boiling stones, boiling sticks or a spin vane. link
Supersaturated is a solution that contains more than the maximum amount of solute at a given temperature. Often causes problems during the recrystallization process. link
TCD =Thermal Conductivity Detector, less sensitive than FID, but allows to collect sample. link
Trituration commonly refers to the grinding of powders in a pestle or mortar. It is a method to induce crystallization of a pure compound from impure oil or the process of separating two solids by selectively dissolving one compound while the other is insoluble. link
UV-Vis spectroscopy is a technique to investigate conjugation within molecules. Often used for colored compounds. Looks at the excitation of electrons from a bonding to an anti-bonding orbital. link
Vacuum filtration is a filtration technique that permits to separate a solid from a liquid. The vacuum increases the flow rate of the mother liquor through the filter paper. Not suitable for low boiling or hot solvents! link
Washing is a process to remove small amounts of byproducts or a catalyst from a reaction mixture. link
Zaitsev's Rule predicts the formation of an alkene based on thermodynamic stability: the alkene with the highest the degree of substitution is preferentially formed under thermodynamic conditions. link