Articles published in peer-reviewed journals are listed under Principal Publications (most recent first). Other publications can be found under... Other Publications (conference proceedings, book chapters, etc).

I decided to give up reporting citations, as this represented too much work sifting through duplicates, mispelled references, etc...
The link that appears when hovering over the Researcher ID badge on the upper left provides this information (based on ISI's databases).
Go the left of the page that opens up, and choose "Citation Metrics".
Of course the list is not (well) curated, so some citations are missing (and probably some are inaccurate).

Another tool is Google Scholar.
I have a profile there too, which, incidentally, usually reports more citations.
Of course, the same caveat as for ISI's databases applies.


Last updated: June 27, 2013



Principal Publications:
 
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Title
Source
Abstract
Article
2013
Development of new photon-counting detectors for single-molecule fluorescence microscopy
Michalet, X., Colyer, R. A., Scalia, G., Ingargiola, A., Lin, R., Millaud, J. E., Weiss, S., Siegmund, O. H. W., Tremsin, A. S., Vallerga, J. V., Cheng, A. , Levi, M., Aharoni, D., Arisaka, K., Villa, F., Guerrieri, F., Panzeri, F., Rech, I., Gulinatti, A., Zappa, F., Ghioni, M., Cova, S.
Philosophical Transactions of the Royal Society B 368: 20120035 (2013) Abstract
PDF
Supporting Information
2012
Optimal diffusion coefficient estimation in single-particle tracking
Michalet, X., Berglund, A. J.
Physical Review E 85: 061916 (2012) Abstract
PDF
Supporting Information
Matlab Code
Phasor imaging with a widefield photoncounting detector
Colyer, R.A., Siegmund, O.H.W., Tremsin, A.S., Vallerga, J.V., Weiss, S., Michalet, X.
Journal of Biomedical Optics 17 (1): 0160008 (2012) Abstract
PDF
2010
High-throughput FCS using an LCOS spatial light modulator and an 8 × 1 SPAD array
Colyer, R.A., Scalia, G., Rech, I., Gulinatti, A., Ghioni, M., Cova, S., Weiss, S., Michalet, X.
Biomedical Optics Express 1: 1408-1431 (2010) Abstract
PDF
Insights on Optics
Mean square displacement analysis of single-particle trajectories with localization error: Brownian motion in an isotropic medium
Michalet, X.
Physical Review E 82: 041914 (2010) Abstract
PDF
Supporting Information
Erratum
Tracking Single Proteins in Live Cells Using Single-Chain Antibody Fragment-Fluorescent Quantum Dot Affinity Pair
Iyer, G., Michalet, X., Chang, Y.-P., Weiss, S.
Methods in Enzymology 475: 61-79 (2010) Abstract
PDF
2009
Single-quantum dot imaging with a photon counting camera
Michalet, X., Colyer, R. A., Antelman, J., Siegmund, O. H. W., Tremsin, A., Vallerga, J. V., Weiss, S.
Current Pharmaceutical Biotechnology 10: 543-557 (2009) Abstract
PDF
Movie 1,2, 3,4,5
Nanometer Distance Measurements between Multicolor Quantum Dots
Antelman, J., Wilking-Chang, C., Weiss, S., Michalet, X.
Nano Letters 9: 2199-2205 (2009) Abstract
PDF
Supporting Information
Lighting Up Individual DNA Binding Proteins with Quantum Dots
Ebenstein, Y., Gassman, N., Kim, S., Antelman, J., Kim, Y., Ho, S., Samuel, R., Michalet, X., Weiss, S.
Nano Letters 9: 1598-1603 (2009) Abstract
PDF
Supporting Information 1
Supporting Information 2
Dynamic Partitioning of a Glycosyl-Phosphatidylinositol-Anchored Protein in Glycosphingolipid-Rich Microdomains Imaged by Single-Quantum Dot Tracking
Pinaud, F., Michalet, X., Iyer, G., Margeat, E., Moore, H.-P., Weiss, S.
Traffic 10: 691-712 (2009) Abstract
PDF
Supporting Information
Movie 1,2,3,4, 5,6,7, 8,9,10
Additional Information
Suppression of Quantum Dot Blinking in DTT-Doped Polymer Films
Antelman, J., Ebenstein,Y.,Dertinger, T., Michalet, X., Weiss, S.
Journal of Physical Chemistry C 113: 11541-11545 (2009) Abstract
PDF
2008
High Affinity scFv-Hapten Pair as a Tool for Quantum Dot Labeling and Tracking of Single Proteins in Live Cells
Iyer, G., Michalet, X., Chang, Y.-P., Pinaud, F. F., Matyas, S. E., Payne, G., Weiss, S.
Nano Letters 8: 4618-4623 (2008) Abstract
PDF
Supporting Information
Movie
Measuring diffusion with polarization-modulation dual-focus fluorescence correlation spectroscopy
Korlann, Y., Dertinger, T., Michalet, X., Weiss, S., Enderlein, J.
Optics Express 16: 14609-14616 (2008) Abstract
PDF
2007
Equilibrium shape degeneracy in starfish vesicles
Michalet, X.
Physical Review E 76: 021914 (2007) Abstract
PDF
Appendix
Movie
Periodic acceptor excitation spectroscopy of single molecules
Doose, S., Heilemann, M., Michalet, X., Weiss, S., Kapanidis, A.N.
European Biophysics Journal 36: 669-674 (2007) Abstract
PDF
Detectors for single-molecule fluorescence imaging and spectroscopy
Michalet, X., Siegmund, O.H.W., Vallerga, J.V., Jelinsky, P., Millaud, J.E., Weiss, S.
Journal of Modern Optics 54: 239-282 (2007) Abstract
PDF
2006
Shot-noise limited single-molecule FRET histogram: comparison between theory and experiments
Nir, E., Michalet, X., Hamadani, K., Laurence, T. A., Neuhauser, D., Kovchegov, Y., Weiss, S.
Journal of Physical Chemistry B 110: 22103-22124 (2006) Abstract
PDF
Supporting Information
Photon-counting H33D detector for biological fluorescence imaging
Michalet, X., Siegmund, O.H.W., Vallerga, J.V., Jelinsky, P., Millaud, J.E., Weiss, S.
Nuclear Instruments and Methods in Physics Research A 567: 133-136 (2006) Abstract
PDF
Single-Molecule Fluorescence Studies of Protein Folding and Conformational Dynamics
Michalet, X., Weiss, S., Jäger, M.
Chemical Reviews 106: 1785-1813 (2006) Abstract
PDF
Advances in fluorescence imaging with quantum dot bio-probes
Pinaud, F., Michalet, X., Bentolila, L. A., Tsay, J. M., Li, J. J., Iyer, G., Weiss, S.
Biomaterials 27: 1679-1687 (2006) Abstract
PDF
2005
Wavefunction engineering: From quantum wells to near-infrared type-II colloidal quantum dots synthesized by layer-by-layer colloidal epitaxy
Li, J. J., Tsay, J. M., Michalet, X., Weiss, S.
Chemical Physics 318: 82-90 (2005) Abstract
PDF
Protein–protein interactions as a tool for site-specific labeling of proteins
Jäger, M., Michalet, X., Weiss, S.
Protein Science 14: 2059-2068 (2005) Abstract
PDF
Accurate FRET Measurements Within Single Diffusing Biomolecules Using Alternating-Laser Excitation
Lee, N. K., Kapanidis, A. N., Wang, Y., Michalet, X., Mukhopadhyay, J., Ebright, R. H., Weiss, S.
Biophysical Journal 88: 2939-2953 (2005) Abstract
PDF
SI
Quantum Dots for Live Cells, in Vivo Imaging, and Diagnostics
Michalet, X., Pinaud, F. F., Bentolila, L. A., Tsay, J. M., Doose, S., Li, J. J., Sundaresan, G., Wu, A. M., Gambhir, S. S., Weiss, S.
Science 307: 538 -544 (2005) Abstract
PDF
SI
2004
Femtomole Mixer for Microsecond Kinetic Studies of Protein Folding
Hertzog, D. E., Michalet, X., Jäger, M., Kong, X., Santiago, J. G., Weiss, S. and Bakajin, O.
Analytical Chemistry 76 (24): 7169 -7178 (2004) Abstract
PDF
2003
The power and prospects of fluorescence microscopies and spectroscopies
Michalet, X., Kapanidis, A.N., Laurence, T.,Pinaud, F., Doose, S., Pflughoefft, M., and Weiss, S.
Annual Reviews in Biophysics and Biomolecular Structures 32: 161-182 (2003) Abstract
PDF
2002
Single-molecule spectroscopy and microscopy
Michalet, X., Weiss. S.
Comptes rendus Physique 2 (4): 619-644 (2002) Abstract
PDF
2001
Properties of Fluorescent Semiconductor Nanocrystals and their Application to Biological Labeling
Michalet, X., Pinaud, F., Lacoste, T. D., Dahan, M., Bruchez, M. P., Alivisatos, A. P., Weiss. S.
Single Molecules 3: 261-276 (2001) Abstract
PDF
Ultrahigh-Resolution Colocalization of Spectrally Separable Point-like Fluorescent Probes
Michalet, X., Lacoste, T. D., Weiss. S.
Methods 25: 87-102 (2001) Abstract
PDF
2000
Ultrahigh-resolution multicolor colocalization of single fluorescent probes
Lacoste, T. D., Michalet, X., Pinaud, F., Chemla, D. S., Alivisatos, A. P., Weiss. S.
Proceedings of the National Academy of Sciences USA 97 (17): 9461-9466 (2000) Abstract
PDF
Quantifying single gene copy number by measuring fluorescent probe lengths on combed genomic DNA
Herrick, J., Michalet, X., Conti, C., Schurra, C., Bensimon, A.
Proceedings of the National Academy of Sciences USA 97 (1): 222-227 (2000) Abstract
PDF
1998
High-resolution mapping of the X-linked lymphoproliferative syndrome region by FISH on combed DNA
Monier, K., Michalet, X., Lamartine, J., Schurra, C., Heitzmann, F., Yin, L., Cinti, R., Sylla,  B. S., Creaven, M., Porta, G., Vourc'h, C., Robert-Nicoud, M., Bensimon, A., Romeo, G.
Cytogenetics and Cell Genetics 81 (3-4): 259-264 (1998) Abstract
PDF
1997
Dynamic Molecular Combing: Stretching the Whole Human Genome for High-Resolution Studies
Michalet, X., Ekong, R., Fougerousse, F., Rousseaux, S., Schurra, C., Hornigold, N., van Slegtenhorst, M., Wolfe, J., Povey, S., Beckmann, J. S., Bensimon, A.
Science 277: 1518-1523 (1997) Abstract
PDF
1995
Vesicles of Toroidal Topology: Observed Morphogy and Shape Transformations
Michalet, X., Bensimon, D.
Journal de Physique II France 5: 263-287 (1995) Abstract
PDF
Observation of Stable Shapes and Conformal Diffusion in Genus 2 Vesicles
Michalet, X., Bensimon, D.
Science 269: 666-668 (1995) Abstract
PDF
1994
Fluctuating Vesicles of Nonspherical Topology
Michalet, X., Bensimon, D., Fourcade, B.
Physical Review Letters 72 (1): 168-171 (1994) Abstract
PDF

Equal contribution.

Other Publications:
 
 
Title
Source
Abstract
Article
2013
Single-molecule FRET experiments with a red-enhanced custom technology SPAD
Panzeri, F., Ingargiola, A., Lin, R. R., Sarkhosh, N., Gulinatti, A., Rech, I., Ghioni, M., Weiss, S., Cova, S., Michalet, X.
Proceedings of SPIE 8590: 85900D (2013) Abstract
PDF
8-spot smFRET analysis using two 8-pixel SPAD arrays
Ingargiola, A., Panzeri, F., Sarkhosh, N., Gulinatti, A., Rech, I., Ghioni, M., Weiss, S., Michalet, X.
Proceedings of SPIE 8590: 85900E (2013) Abstract
PDF
2012
Large Area and High Efficiency Photon Counting Imaging Detectors with High Time and Spatial Resolution for Night Time Sensing and Astronomy
Siegmund, O. H. W., Vallerga, J. V., Tremsin, A. S., McPhate, J. B., Michalet, X., Weiss, S., Frisch, H., Wagner, R., Mane, A., Elam, J., Varner, G.
Proceedings of AMOS 2012: 1-6 (2012) Abstract
PDF
Parallel multispot smFRET analysis using an 8-pixel SPAD array
Ingargiola, A., Colyer, R.A., Kim, D., Panzeri, F., Lin, R., Gulinatti, A., Rech, I., Ghioni, M., Weiss, S., Michalet, X.
Proceedings of SPIE 8228: 82280B (2012) Abstract
PDF
2011
Microchannel Plate Imaging Photon Counters for Ultraviolet through NIR Detection with High Time Resolution
Siegmund, O. H. W., Vallerga, J. V., Tremsin, A. S., Michalet, X., Colyer, R.A., Weiss, S.
Proceedings of SPIE 8033: 80330V (2011) Abstract
PDF
New photon-counting detectors for single-molecule fluorescence spectroscopy and imaging
Michalet, X., Colyer, R.A., Scalia G., Weiss, S., Siegmund, O. H. W., Tremsin, A. S., Vallerga, J. V., Villa, F., Guerrieri, F., Rech, I., Gulinatti, A., Tisa, S., Zappa, F., Ghioni, M., Cova, S.
Proceedings of SPIE 8033: 803316 (2011) Abstract
PDF
Ultrahigh-throughput single molecule spectroscopy with a 1024 pixel SPAD
Colyer, R.A., Scalia, G., Villa, F. A., Guerrieri, F., Tisa, S., Zappa, F., Cova, S., Weiss, S., Michalet, X.
Proceedings of SPIE 7905: 790503 (2011) Abstract
PDF
2010
Single-molecule fluorescence spectroscopy and imaging
Michalet, X., Colyer, R.A., Weiss, S.
SPIE Newsroom, October 2010 Abstract
PDF
High-throughput multispot single-molecule spectroscopy
Colyer, R.A., Scalia, G., Kim, T., Rech, I., Resnati, D., Marangoni, S., Ghioni, M., Cova, S., Weiss, S., Michalet, X.
Proceedings of SPIE 7571: 75710G (2010) Abstract
PDF
High-throughput single-molecule fluorescence spectroscopy using parallel detection
Michalet, X., Colyer, R.A., Scalia, G., Kim, T., Levi, M., Aharoni, D., Cheng, A., Guerrieri, F., Arisaka, K. Millaud, J., Rech, I., Resnati, D., Marangoni, S., Gulinatti, A., Ghioni, M., Tisa, S., Zappa, F., Cova, S., Weiss, S.
Proceedings of SPIE 7608: 76082D (2010) Abstract
PDF
2009
High Speed Multichannel Charge Sensitive Data Acquisition System With Self-Triggered Event Timing
Tremsin, A. S., Siegmund, O.H.W., Vallerga, J.V., Raffanti, R., Weiss, S., Michalet, X.
IEEE Transactions on Nuclear Science 56 (3): 1148-1152 (2009) Abstract
PDF
Phasor-based single-molecule fluorescence lifetime imaging using a wide-field photon-counting detector
Colyer, R.A., Siegmund, O.H.W., Tremsin, A., Vallerga, J.V., Weiss, S., Michalet, X.
Proceedings of SPIE 7185: 71850T (2009) Abstract
PDF
Chapter 3: Peptide-Functionalized Quantum Dots for Live Diagnostic Imaging and Therapeutic Applications
Bentolila, L. A., Doose, S., Ebenstein, Y., Iyer, G., Li, J.J., Michalet, X., Tsay, J., Weiss, S.
Inorganic Nanoprobes for Biological Sensing and Imaging, Mattoussi, H., Cheon, J., Eds, Artech House, Boston, 2009
 
PDF
2008
Chapter 8: Molecular Imaging: Physics and Bio-Applications of Quantum Dots
Michalet, X., Bentolila, L. A., Weiss, S.
Advances in Medical Physics, Wolbarst, A. B., Hendee, W. R., Eds, Medical Physics Publishing, Madison, 2008
 
PDF
Hybrid photodetector for single-molecule spectroscopy and microscopy
Michalet, X., Cheng, A., Antelman, J., Suyama, M., Arisaka, K., Weiss, S.
Proceedings of SPIE 6862: 68620F (2008) Abstract
PDF
Chapter 3: Quantum optics: Colloidal fluorescent semiconductor nanocrystals (quantum dots) in single-molecule detection and imaging
Bentolila, L. A., Michalet, X., Weiss, S.
Single Molecules and Nanotechnology, Rigler, R., Vogel, H., Eds, Springer-Verlag, Berlin Heidelberg, 2008
 
PDF
2007
Detectors for Microscopy: Next-generation 3-D detector improves single-molecule imaging
Michalet, X., Siegmund, O.H.W., Vallerga, J.V., Jelinsky, P., Millaud, J.E., Arisaka, K., Weiss, S.
Laser Focus World 43: 97-101 (2007) Abstract
PDF
2006
Peptide Coated Quantum Dots for Biological Applications
Iyer, G., Pinaud, F., Tsay, J.,Li, J. J., Bentolila, L. A., Michalet, X.,Weiss, S.
IEEE Transactions on Nanobioscience, 5: 231-238 (2006) Abstract
PDF
Fluorescence lifetime microscopy with a time- and space-resolved single-photon counting detector
Michalet, X., Siegmund, O.H.W., Vallerga, J.V., Jelinsky, P., F. F. Pinaud, Millaud, J.E.,Weiss, S.
Proceedings of SPIE 6372: 63720E (2006) Abstract
PDF
Chapter 7: Molecular Imaging
Michalet, X., Bentolila, L., Weiss, S.
Advances in Medical Physics, Wolbarst, A. B., Zamenhof, R. G., Hendee, W. R., Eds, Medical Physics Publishing, Madison, 2006  
PDF
Using photon statistics to boost microscopy resolution
Michalet, X., Weiss, S.
Proceedings of the National Academy of Sciences USA 103 (13): 4797-4798 (2006) Abstract
PDF
Near-infrared peptide-coated quantum dots for small animal imaging
Iyer, G., Li, J. J., Pinaud, F., Tsay, J. M., Bentolila, L. A., Michalet, X., Weiss, S.
Proceedings of SPIE 6096: 60960B (2006) Abstract
PDF
Development of an Ultra-fast Single-Photon Counting Imager for Single-Molecule Imaging
Ohnukia, T., Michalet, X., Tripathia, A., Weiss, S., Arisaka, K.
Proceedings of SPIE 6092: 60920P (2006) Abstract
PDF
A space- and time-resolved single-photon counting detector for fluorescence microscopy and spectroscopy
Michalet, X., Siegmund, O.H.W., Vallerga, J.V., Jelinsky, P., Millaud, J.E., Weiss, S.
Proceedings of SPIE 6092: 60920M (2006) Abstract
PDF
2005
Cross Delay Line Detectors for High Time Resolution Astronomical Polarimetry and Biological Fluorescence Imaging
Siegmund, O.H.W., Michalet, X., Vallerga, J.V., Jelinsky, P., Weiss, S.
IEEE Nuclear Science Symposium Conference Record N14-55: 448-452 (2005) Abstract
PDF
New Light on Quantum Dot Cytotoxicity
Tsay, J. M., Michalet, X.
Chemistry & Biology 12: 1159-1161 (2005) Abstract
PDF
Correspondence: Thoughtful peer review is worth the time it takes
Michalet, X.
Nature 435: 1160 (2005) Comment
PDF
Quantum Dots for Molecular Imaging and Cancer Medicine
Bentolila, L.A., Michalet, X., Pinaud, F. F., , Tsay, J. M., Doose, S., Li, J. J., Sundaresan, G., Wu, A.M., Gambhir, S.S., Weiss, S.
Discovery Medicine 5 (26): 213-218 (2005)  
PDF
Peptide-coated semiconductor nanocrystals for biomedical applications
Michalet, X., Pinaud, F. F., Bentolila, L.A., Tsay, J. M., Doose, S., Li, J. J., Iyer, G., Weiss, S.
Proceedings of SPIE 5704: 57-68 (2005) Abstract
PDF
Single-Molecule Spectroscopy
Michalet, X., Weiss, S.
Encyclopedia of Modern Optics, 5 Vol., Guenther B. D. Editor, Elsevier, p 147-162 (2005)  
PDF
2001
Single-Molecule Spectroscopy Comes of Age
Kelley, A. M., Michalet, X., Weiss, S.
Science 292: 1671-1672 (2001) Abstract
PDF
Stretching Single-Stranded DNA on a Surface
Michalet, X.
Nanoletters 1 (7): 341-343 (2001) Abstract
PDF
Ultrahigh Resolution Multicolor Colocalization of Single Fluorescent Nanocrystals
Michalet, X., Lacoste, T. D., Pinaud, F., Chemla. D. S., Alivisatos, A. P., Weiss. S.
Proceedings of SPIE 4258: 8-15 (2001) Abstract
PDF
1997
Correspondence: French research needs
Michalet, X.
Nature 388 120 (1997) Comment
PDF
Peignage moléculaire d'ADN. Cartographie physique du génome et diagnostic génétique
Michalet, X., Bensimon, A.
Médecine/Sciences 13 (11): 1299-1305 (1997) Abstract
PDF
Le peignage moléculaire: un outil à haute résolution
Michalet, X., Bensimon, A.
Biofutur 165 Technoscope, Cahier 90: 8 (1997) Abstract
PDF
1996
Vesicles of Complex Topology
Fourcade, B., Michalet, X., Bensimon, D.
in Nonmedical Applications of Liposomes.  Theory and Basic Sciences. Lasic, D.D., Barenholz, Y., Editors.
Vol. I, CRC Press (1996)
 
PDF
1995
Toroidal vesicles: observed morphology and numerical modelisation
Michalet, X., Bensimon, D.
in Interplay of Genetic and Physical Processes in the Develoment of Biological Form.  At the Frontier of Physics and Biology.
Beysens, D., Forgacs, G., Gaill, F., Editors. Les Houches  Series,  p 23-37, World Scientific (1995)
 
PDF
1994
La physique des liposomes
Michalet, X., Jülicher, F., Fourcade, B., Seifert, U., Bensimon, D.
La Recherche 25 (269): 1012-1018 (1994) Abstract
PDF
Vesicles of high topological genus
Michalet, X., Bensimon, D., Fourcade, B.
in Soft Order in Physical Systems
Rabin, Y., Bruinsma, R., Editors. Proceedings of a NATO Advanced Research Workshop, Les Houches. p 199-202, Plenum Press (1994)
Abstract
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© 1999-2013, X. Michalet